Arabidopsis database

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August undefined, 2024

WebProof-of-concept analysis suggests that the MeKO database is highly useful for the generation of hypotheses for genes of interest and for improving gene annotation. … WebArabidopsis has long been a primary model system for plant genetics and development including numerous plant processes such as ethylene signal transduction. Arabidopsis …

AT3G48231(LCR48) - arabidopsis.org

WebThe Arabidopsis PeptideAtlas provides a compendium of results from uniformly reprocessed mass spectrometry proteomics datasets. Publicly-available Arabidopsis thaliana columbia-0 datasets were downloaded from ProteomeXchange and reprocessed from the raw files using the Trans-Proteomic Pipeline suite of tools. A publication … WebArabidopsis thaliana Functional Genomic Resource Database : T-DNA, Full-length cDNA About Us PBIO-E Data Release Policy. cDNA Project T-DNA Express iSect Tools RiceGE Transcriptome CREB Data ATGC Data. SIGnAL-2 ... Arabidopsis 1,001 Genomes, Epigenomes, transcriptomes & Physical Maps. Salk Arabidopsis 1,001 Genomes. harvey norman malaysia gift card

Arabidopsis thaliana Genome DB - PlantGDB

WebThe database currently contains 1187 unique tryptic peptide sequences encompassing 1053 Arabidopsis proteins. Among the characterized phosphorylation sites, there are over 1000 with unambiguous site assignments, and nearly 500 for which the precise phosphorylation site could not be determined. Web16 mag 2009 · We developed a database of higher plants' UPS, ... (E2), and ubiquitin protein ligase (E3). There are approximately 1300 E3s in the Arabidopsis genome, and similarly large numbers in other plants. However, in most plant species, the genome-wide classification and annotation of UPS genes, especially E3 families, ... Web14 ott 2015 · In the past 50 yr, 54 033 Arabidopsis papers – defined as having Arabidopsis in the title, abstract or keywords in Thomson Reuter's BIOSIS database – covering 406 different biological fields have been published, most in the second half of this time frame (see Fig. 1 for the distribution of some of the more general research areas). harvey norman maitland nsw

Arabidopsis database

Arabidopsis Interactions Viewer (AIV) 2.0 - University of Toronto

WebBLAST-able datasets include Arabidopsis thaliana genomic DNA, splice-aligned transcripts and proteins, gene models, and other aligned sequences. Spliced alignment of user … WebEukaryotic Promoter Database (EPD) Genevisible Expression Data The Subcellular Location of Proteins in Arabidopsis Database (SUBA) TraVA:Transcription Variation Analysis: Gene Families Links moved to Gene Families band [show me where] Genomics AceView Gramene MIPS NCBI-Entrez Gene Thalemine at BAR: Interactions BioGRID: …

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WebArabidopsis Interactions Viewer 2.0. Visualize predicted & experimentally validated protein-protein/DNA interactions ... All subcellular localisation data is from SUBA, the Arabidopsis Subcellular Database (Hooper et al., 2024). Additional protein function data is from MapMan (Usadel et al., 2009). WebHere, we develop an Arabidopsis hormone database (AHD), which aims to provide a systematic and comprehensive view of genes participating in plant hormonal regulation, as well as morphological phenotypes controlled by plant hormones. Based on data from mutant studies, transgenic analysis and gene ontology annotation, we have identified a total ...

Web20 lug 2024 · For Arabidopsis samples (125 Mb genome size), we typically pool 48 samples per lane on an Illumina HiSeq 2500 and 96 samples per lane on an Illumina HiSeq 4000, aiming for 2–4 million reads per ... WebThe Arabidopsis Information Resource (TAIR) is a highly sophisticated, extensive, ... protein, expression and community data in the form of a relational database. These data can be searched, downloaded and analysed using the tools provided. Here, the simple search (for retrieval of information), Seq Viewer ...

WebAbout TAIR The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana.Data … Browse old Arabidopsis publications only available as electronic files. The … Tools Overview. This page provides links to all the analysis and visualization tools … Information on Arabidopsis high throughput expression data, such as microarrays, … Contains data files (including pathways, reactions, enzymes and loci) from the … For inclusion on the TAIR Arabidopsis Gene Family page. Gene Function Submission … This page provides news and events for the Arabidopsis research community. TAIR … About TAIR The Arabidopsis Information Resource (TAIR) maintains a database … This section of TAIR's website contains links to documents to help you … WebPubMed

WebArabidopsis proteins have been associated to a variety of physiochemical features such as molecular weight and PI which can be used to find candidates from 2-D gels. ... For more …

Web12 ore fa · Introductionβ-Mannanase is a plant cell wall remodeling enzyme involved in the breakdown of hemicellulose and plays an important role in growth by hydrolyzing the mannan-like polysaccharide, but its function in adaptation to salt stress has been less studied.MethodsBased on cloned the mannanase (MAN) gene from Mirabilis jalapa L., … harvey norman mandurah hoursWeb1 feb 2015 · EPD selection tool: Promoter subset selection based on EPD-supplied annotation. ChIP-Cor: Promoter subset selection based on experimental data or genome … harvey norman manchester onlineWebOur previous Arabidopsis RNA-seq database (ARS) has been updated recently, and the number of libraries has been increased from 20 068 to 28 164 (Zhang et al., 2024). We also plan to continue updating PPRD regularly by including new libraries and … harvey norman manly valeWeb1 gen 2013 · Typically, databases have three components: the database software for storing data, software that translates and executes requests (queries), and software … harvey norman management teamWebEukaryotic Promoter Database (EPD) Genevisible Expression Data The Subcellular Location of Proteins in Arabidopsis Database (SUBA) TraVA:Transcription Variation Analysis: Gene Families Links moved to Gene Families band [show me where] Genomics AceView Gramene MIPS NCBI-Entrez Gene Thalemine at BAR: Interactions BioGRID: … harvey norman malaysia citta mallWeb9 apr 2024 · This work aimed to comparatively investigate the function of the TDP1 genes by taking advantage of the rich transcriptomics databases available for the Arabidopsis thaliana model plant. A data mining approach was carried out to collect information regarding gene expression in different tissues, genetic backgrounds, and stress … book showerWeb29 dic 2024 · Introduction. Highly organized structural features of the Arabidopsis root apical meristem (RAM) make it a valuable model system for investigating how stem cells drive creation of differentiated tissues (Drapek et al., 2024).The RAM consists of a stem cell niche located near the tip of the root that is protected from below by cells that are … harvey norman malaysia discount code